read#

mudata.read(filename: os.PathLike, **kwargs) Union[mudata._core.mudata.MuData, anndata._core.anndata.AnnData]#

Read MuData object from HDF5 file or AnnData object (a single modality) inside it

This function is designed to enhance I/O ease of use. It recognises the following formats:

  • FILE.h5mu

  • FILE.h5mu/MODALITY

  • FILE.h5mu/mod/MODALITY

  • FILE.h5ad