to_anndata#
- mudata.to_anndata(mdata: MuData, **kwargs) AnnData #
Convert MuData to AnnData by concatenating modalities
If mdata.axis == 0 (shared observations), concatenate modalities along axis 1 (anndata.concat(axis=1)). If mdata.axis == 1 (shared variables), concatenate datasets along axis 0 (anndata.concat(axis=0)).
- Parameters:
data (MuData) – MuData object to convert to AnnData
kwargs (dict) – Keyword arguments passed to anndata.concat