Accessors and paths

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Accessors and paths#

mudata.acc provides accessors that create references to axis-aligned 1D and 2D arrays in MuData objects. See the corresponding AnnData documentation.

Important

This functionality requires AnnData 0.13.2 or newer.

The central accessor is A.

mudata.acc.A: MuAcc[AdRef] = A#

Accessor to create AdRefs (A).

See MuAcc and AdAcc for examples of how to use it to create references (i.e. AdRefs).

MuAcc([ref_class, layer_cls, meta_cls, ...])

Accessor to create AdRefs (A).

MultiModAcc(*, ref_class[, ref_acc_cls])

Accessor for modalities (mod).

ModAcc([ref_class, layer_cls, meta_cls, ...])

Accessor to create AdRefs (A) for modalities (mod).

ModMapAcc(dim, *, ref_class)

Reference accessor for modality maps (obsmap / varmap).

ModMetaAcc(dim, *, ref_class, mod)

Reference accessor for arrays from metadata containers (obs / var).

ModLayerAcc(k, *, ref_class, mod)

Reference accessor for arrays in layers.

ModGraphAcc(dim, k, *, ref_class, mod)

Reference accessor for arrays from graph containers (obsp / varp).

ModMultiAcc(dim, k, *, ref_class, mod)

Reference accessor for arrays from multi-dimensional containers (obsm / varm).

ModMultiMapAcc(dim[, ref_acc_cls])

Accessor for multi-dimensional array containers (obsm / varm).

ModGraphMapAcc(dim[, ref_acc_cls])

Accessor for graph containers (obsp / varp)
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