write

mudata.write(filename: PathLike, data: MuData | AnnData)

Write MuData or AnnData to an HDF5 file

This function is designed to enhance I/O ease of use. It recognises the following formats of filename:

• for MuData

  • FILE.h5mu

• for AnnData

  • FILE.h5mu/MODALITY

  • FILE.h5mu/mod/MODALITY

  • FILE.h5ad